Don�t lose your mind you may need it again someday after the baby grows up:) Basically, you don�t litter box train the baby skunk the baby skunk trains you. Watch where the little one is doing his or her business and put the litter box there. Use whatever litter you have but that could be a problem use torn up newspapers. Then gradually add litter switching it over. You may have to use this approach with more than one litter box. If the skunk is going in more than one place, put a litter box in each place. If there is an occasional accident spot get a good neutralizer and clean it up.
There are products on the market that literally eat the bacteria that cause the odor. See if you can find this book in the library.
Pet Clean up Made EasyBe patient skunks are very different than any other pet